STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108928930Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
Z043_122860
POU domain protein.
    
 0.823
LOC108927865
Catenin beta-1-like.
    
 0.527
CTNNB1
Catenin beta 1.
    
 0.527
sall4
Sal-like protein 4-like.
   
 0.515
LOC108925068
Dmrt1a-like.
    
 0.498
wt1
Wilms tumor protein isoform X1.
    
 0.466
klf18
Krueppel-like factor 4-like.
    
 0.459
LOC108928831
SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.454
ube2i
SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.454
Prdm14
PR domain zinc finger protein 14-like.
    
 0.449
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.