STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd33bAnkyrin repeat domain-containing protein 33B-like. (520 aa)    
Predicted Functional Partners:
polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like.
  
  
 0.547
gart
ATP-grasp domain-containing protein.
  
 
 0.524
ENSSFOP00015013696
SH3 and multiple ankyrin repeat domains 1.
   
 0.522
SHANK3
SAM domain-containing protein.
   
 0.522
SHANK3-2
SH3 and multiple ankyrin repeat domains protein 3-like isoform X1.
   
 0.522
Z043_119522
SH3 and multiple ankyrin repeat domains protein 1-like.
   
 0.522
RIMS2
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.519
Z043_118045
Uncharacterized protein.
   
 
 0.519
LOC108921283
Adenine phosphoribosyltransferase 1-like.
  
 
 0.515
apba1
Amyloid beta A4 protein-binding family A member 1-like.
    
 0.515
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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