STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prorpMitochondrial ribonuclease P protein 3-like. (582 aa)    
Predicted Functional Partners:
Z043_108023
Mitochondrial ribonuclease P protein 1-like.
   
 0.976
hsd17b10
3-hydroxyacyl-CoA dehydrogenase type-2-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.976
fdft1
Squalene synthase-like.
   
 
 0.736
trmt10a
tRNA methyltransferase 10A-like.
   
 0.700
Z043_123905
SAM-dependent MTase TRM10-type domain-containing protein.
   
 0.700
shpk
Sedoheptulokinase-like.
      
 0.641
ndufaf6
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6-like.
   
 
 0.609
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.579
LOC108919137
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.579
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
      
 0.575
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.