STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mib2Uncharacterized protein. (955 aa)    
Predicted Functional Partners:
Rps27a
Ubiquitin and ribosomal protein S27a-like protein-like.
   
 0.987
uba52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.978
Tradd
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
  0.920
prkn
Ubiquitin-like domain-containing protein.
    
 0.901
LOC108930839
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.897
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.897
LOC114910717
Polyubiquitin-C.
   
 0.864
Z043_114048
Ubiquitin-like protein-like.
   
 0.862
ubl4a
Ubiquitin-like protein 4A-like.
   
 0.862
ENSSFOP00015074406
annotation not available
   
 0.862
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.