STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29Ras-related protein Rab-7L1-like. (214 aa)    
Predicted Functional Partners:
rabggta
RabGGT_insert domain-containing protein.
    
 0.687
Z043_104959
Cyclin-G-associated kinase-like.
    
 
 0.674
LOC108934451
Uncharacterized protein.
    
 0.650
Z043_114546
Rab interacting lysosomal protein-like 2-like.
      
 0.647
RILPL1
RILP-like protein 1-like.
      
 0.609
pm20d1
M20_dimer domain-containing protein.
      
 0.572
bag5
BAG family molecular chaperone regulator 5-like.
    
 
 0.548
Hps1
Hermansky-Pudlak syndrome 1 protein-like.
     
 0.542
ptar1
Uncharacterized protein.
    
 0.531
hps4
Hermansky-Pudlak syndrome 4 protein isoform X1.
     
 0.493
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.