STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108923842Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (375 aa)    
Predicted Functional Partners:
CKAP4
Uncharacterized protein.
   
 
 0.573
ska1
Uncharacterized protein.
   
 
 0.514
ska2
SKA2 domain-containing protein.
   
 
 0.512
CLSPN
Claspin-like.
   
 
 0.479
SMARCAL1
Putative SWI/SNF-related matrix-associated actin-dependent regulator; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 
 0.454
zranb3
DNA annealing helicase and endonuclease ZRANB3-like.
    
 
 0.454
wrn
Werner syndrome ATP-dependent helicase isoform X1.
   
 
 0.450
timeless
Protein timeless-like.
   
 
 0.449
Tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.444
rpa3
Replication protein A3, 14kDa-like.
   
   0.432
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.