STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_124758DDB1-and CUL4-associated factor 8-like. (448 aa)    
Predicted Functional Partners:
ddb1
DNA damage-binding protein 1-like.
    
 0.908
dcaf5
Uncharacterized protein.
   
 
0.729
dcaf4
DDB1-and CUL4-associated factor 4-like.
     
 0.705
CUL4B
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.688
CUL4B-2
Cullin-4B-like; Belongs to the cullin family.
   
 0.688
Cul4a
Cullin-4A-like; Belongs to the cullin family.
   
 0.688
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.670
ddb2
DNA damage-binding protein 2-like.
    
 0.647
COMMD10
COMM domain-containing protein 10-like.
     
 0.633
commd2
COMM domain-containing protein 2-like.
     
 0.630
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.