STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108933414Chromobox protein 3-like. (711 aa)    
Predicted Functional Partners:
suv39h1
Histone-lysine N-methyltransferase SUV39H1-like.
   
0.808
Z043_109692
THAP-type domain-containing protein.
   
 0.713
ehmt1
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.710
LOC108938542
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.710
Z043_105403
Histone-lysine N-methyltransferase EHMT2-like.
    
 0.710
mbtd1
MBT domain-containing protein 1-like.
    
 0.678
ENSSFOP00015039015
annotation not available
    
 0.678
l3mbtl2
Uncharacterized protein.
    
 0.678
Z043_123235
CAF1-p150_N domain-containing protein.
   
 
 0.640
emsy
Protein EMSY-like.
    
 
 0.624
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.