STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108939028Nudix hydrolase 20, chloroplastic-like isoform X2. (305 aa)    
Predicted Functional Partners:
Dcp1a
MRNA-decapping enzyme 1A.
    
 0.760
Dcp1b
mRNA-decapping enzyme 1B-like.
    
 0.760
Xrn1
5'-3' exoribonuclease 1-like.
   
 0.738
patl2
PAT1 domain-containing protein.
    
 0.730
patl1
Uncharacterized protein.
    
 0.730
EDC4
Enhancer of mRNA-decapping protein 4-like.
    
 0.686
LOC108919001
Enhancer of mRNA-decapping protein 4-like.
    
 0.686
LOC108926202
Enhancer of mRNA-decapping protein 3-like.
  
 0.677
naxe
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.677
LOC108930154
Enhancer of mRNA-decapping protein 3-like.
  
 0.677
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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