ddx1 protein (Scleropages formosus) - STRING interaction network

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ddx1

ATP-dependent RNA helicase DDX1-like. (740 aa)

Predicted Functional Partners:

Rtraf

0.979

ENSSFOP00015016557

0.948

LOC108931978

0.936

RTCB

0.936

fam98a

0.936

c1h2orf49

0.901

Fam98b

0.887

LOC108924842

0.828

eprs1

0.796

zbtb8os

0.769

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015016557	Fam98b	ENSSFOP00015016557	ENSSFOP00015016542	annotation not available	Protein FAM98B-like.	0.899
ENSSFOP00015016557	LOC108931978	ENSSFOP00015016557	ENSSFOP00015001105	annotation not available	Uncharacterized protein.	0.875
ENSSFOP00015016557	RTCB	ENSSFOP00015016557	ENSSFOP00015018015	annotation not available	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.875
ENSSFOP00015016557	Rtraf	ENSSFOP00015016557	ENSSFOP00015014924	annotation not available	UPF0568 protein C14orf166-like.	0.946
ENSSFOP00015016557	c1h2orf49	ENSSFOP00015016557	ENSSFOP00015064461	annotation not available	Ashwin-like.	0.918
ENSSFOP00015016557	ddx1	ENSSFOP00015016557	ENSSFOP00015022576	annotation not available	ATP-dependent RNA helicase DDX1-like.	0.948
ENSSFOP00015016557	zbtb8os	ENSSFOP00015016557	ENSSFOP00015037032	annotation not available	Protein archease-like.	0.662
Fam98b	ENSSFOP00015016557	ENSSFOP00015016542	ENSSFOP00015016557	Protein FAM98B-like.	annotation not available	0.899
Fam98b	LOC108931978	ENSSFOP00015016542	ENSSFOP00015001105	Protein FAM98B-like.	Uncharacterized protein.	0.816
Fam98b	RTCB	ENSSFOP00015016542	ENSSFOP00015018015	Protein FAM98B-like.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.816
Fam98b	Rtraf	ENSSFOP00015016542	ENSSFOP00015014924	Protein FAM98B-like.	UPF0568 protein C14orf166-like.	0.887
Fam98b	c1h2orf49	ENSSFOP00015016542	ENSSFOP00015064461	Protein FAM98B-like.	Ashwin-like.	0.855
Fam98b	ddx1	ENSSFOP00015016542	ENSSFOP00015022576	Protein FAM98B-like.	ATP-dependent RNA helicase DDX1-like.	0.887
Fam98b	zbtb8os	ENSSFOP00015016542	ENSSFOP00015037032	Protein FAM98B-like.	Protein archease-like.	0.582
LOC108924842	Rtraf	ENSSFOP00015010815	ENSSFOP00015014924	Uncharacterized protein.	UPF0568 protein C14orf166-like.	0.806
LOC108924842	ddx1	ENSSFOP00015010815	ENSSFOP00015022576	Uncharacterized protein.	ATP-dependent RNA helicase DDX1-like.	0.828
LOC108931978	ENSSFOP00015016557	ENSSFOP00015001105	ENSSFOP00015016557	Uncharacterized protein.	annotation not available	0.875
LOC108931978	Fam98b	ENSSFOP00015001105	ENSSFOP00015016542	Uncharacterized protein.	Protein FAM98B-like.	0.816
LOC108931978	Rtraf	ENSSFOP00015001105	ENSSFOP00015014924	Uncharacterized protein.	UPF0568 protein C14orf166-like.	0.894
LOC108931978	c1h2orf49	ENSSFOP00015001105	ENSSFOP00015064461	Uncharacterized protein.	Ashwin-like.	0.861