STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cicProtein capicua-like. (2794 aa)    
Predicted Functional Partners:
LOC108940667
Ataxin-1-like.
    
 
 0.844
atxn1
Ataxin-1-like.
    
 
 0.844
LOC108936893
AXH domain-containing protein.
    
 
 0.844
atxn1l
AXH domain-containing protein.
    
 
 0.703
rbm17
Splicing factor 45-like.
      
 0.565
LOC108934674
Paired amphipathic helix protein Sin3a-like.
   
 
 0.479
sin3b
Paired amphipathic helix protein Sin3b-like.
   
 
 0.479
LOC108942437
Paired amphipathic helix protein Sin3a-like.
   
 
 0.479
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.