STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAPK1Death-associated protein kinase 1-like. (1432 aa)    
Predicted Functional Partners:
becn1
Beclin-1-like.
   
 0.918
calm1
Calmodulin-like; Belongs to the calmodulin family.
   
 0.568
calm1-2
Calmodulin.
   
 0.568
calm1-3
Calmodulin.
   
 0.568
calm1-4
Calmodulin-like; Belongs to the calmodulin family.
   
 0.568
calm1-5
Calmodulin.
   
 0.568
calm1-6
Calmodulin-like; Belongs to the calmodulin family.
   
 0.568
calm1-7
Calmodulin.
   
 0.568
Z043_121986
HORMA domain-containing protein 1-like.
   
 
 0.435
CASK
Peripheral plasma membrane protein CASK-like; Belongs to the MAGUK family.
   
0.434
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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