STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1fProtein phosphatase 1F-like. (421 aa)    
Predicted Functional Partners:
crnkl1
Crooked neck-like protein 1-like.
   
  
 0.574
ascc2
CUE domain-containing protein.
      
 0.571
ccdc92
CCDC92 domain-containing protein.
      
 0.566
kansl2
KAT8 regulatory NSL complex subunit 2-like.
   
  
 0.566
ess2
Protein DGCR14-like.
   
  
 0.564
prcc
Proline-rich protein PRCC-like.
      
 0.562
tab3
RanBP2-type domain-containing protein.
    
 0.553
tab2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
    
 0.553
fem1b
Protein fem-1B-like.
   
 
 0.545
fem1c
Protein fem-1C-like.
   
 
 0.545
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.