STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108921282Calpain-2 catalytic subunit-like. (696 aa)    
Predicted Functional Partners:
ENSSFOP00015077397
Calpastatin-like isoform X1.
   
 0.731
LOC108928032
Uncharacterized protein.
   
0.601
LOC108928138
Uncharacterized protein.
   
0.601
LOC108928638
Calpain small subunit 1-like.
   
0.601
LOC108924088
Intersectin-2-like.
   
 
  0.523
LOC108922646
Uncharacterized protein.
   
 
  0.523
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
   
 
 0.509
LOC108927712
Programmed cell death protein 6-like.
   
 0.407
Z043_109537
Uncharacterized protein.
   
 0.407
pef1
Uncharacterized protein.
   
 0.407
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.