STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
masp1Mannan-binding lectin serine protease 1-like; Belongs to the peptidase S1 family. (722 aa)    
Predicted Functional Partners:
ENSSFOP00015066219
Plasma protease C1 inhibitor-like isoform X1.
   
 0.780
ENSSFOP00015007163
Hepatocyte growth factor receptor-like isoform X3.
    
 0.615
mst1r
Uncharacterized protein.
    
 0.615
LOC108936971
Sema domain-containing protein.
    
 0.615
LOC108931650
Hepatocyte growth factor receptor-like.
    
 0.615
Z043_117341
Complement C1r subcomponent-like; Belongs to the peptidase S1 family.
  
  
 
0.610
colec10
C-type lectin domain-containing protein.
    
 0.602
colec11
C-type lectin domain-containing protein.
    
 0.602
LOC108941674
Complement C4-B-like.
   
 0.590
Z043_125082
Anaphylatoxin-like domain-containing protein.
   
 0.590
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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