STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxw12Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
mnat1
CDK-activating kinase assembly factor MAT1-like.
   
 0.953
ccnh
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.952
gtf2h3
General transcription factor IIH subunit 3-like.
    
 0.951
ercc2
TFIIH basal transcription factor complex helicase XPD subunit-like.
    
 0.946
gtf2e2
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.943
Gtf2h2c
C2H2-type domain-containing protein.
   
 0.941
gtf2h1
General transcription factor IIH subunit 1-like.
   
 0.939
gtf2e1
General transcription factor IIE subunit 1-like.
    
 0.937
ercc3
TFIIH basal transcription factor complex helicase XPB subunit-like.
    
 0.935
gtf2h4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.924
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.