STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtf2h5TFIIH basal transcription factor complex TTD-A subunit. (71 aa)    
Predicted Functional Partners:
ercc3
TFIIH basal transcription factor complex helicase XPB subunit-like.
   
 0.997
gtf2h4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.996
gtf2h1
General transcription factor IIH subunit 1-like.
    
 0.985
gtf2h3
General transcription factor IIH subunit 3-like.
    
 0.985
ercc2
TFIIH basal transcription factor complex helicase XPD subunit-like.
    
 0.982
ccnh
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.972
Gtf2h2c
C2H2-type domain-containing protein.
    
 0.970
mnat1
CDK-activating kinase assembly factor MAT1-like.
    
 0.942
gtf2e1
General transcription factor IIE subunit 1-like.
   
 0.930
Z043_124132
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.925
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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