STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_109018Uncharacterized protein. (805 aa)    
Predicted Functional Partners:
Racgap1
Rac GTPase-activating protein 1-like.
   
 
 0.805
ENSSFOP00015037142
Si:ch1073-416j23.1.
   
 
 0.805
ncapg
Condensin complex subunit 3-like.
   
  
 0.682
Z043_109017
Coiled-coil domain-containing protein 28A-like.
 
    
 0.662
cep55
Centrosomal protein of 55 kDa-like.
   
 
 0.650
Z043_102119
Dual specificity protein kinase Ttk-like.
   
  
 0.646
spag6
Sperm-associated antigen 6-like.
   
   0.629
Cfap161
Uncharacterized protein.
   
    0.617
Z043_107649
Abnormal spindle-like microcephaly-associated protein-like.
   
 
 0.601
kif23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.585
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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