STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108927255Protein CutA-like. (170 aa)    
Predicted Functional Partners:
cutc
Copper homeostasis protein cutC-like.
      
 0.546
Z043_102881
Molybdenum cofactor biosynthesis protein 1-like.
     
 0.522
fblim1
Filamin-binding LIM protein 1-like.
    
   0.463
ccs
Copper chaperone for superoxide dismutase-like.
      
 0.459
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.456
atic
Bifunctional purine biosynthesis protein PURH-like.
     
 0.449
washc4
Uncharacterized protein.
      
 0.440
dus3l
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
     
 0.414
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.