STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a7Zinc transporter SLC39A7-like. (472 aa)    
Predicted Functional Partners:
cwc27
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      0.691
SLC39A11
Uncharacterized protein.
    
 
 0.687
pfdn6
Prefoldin subunit 6-like.
   
  
 0.639
slc30a7
Zinc transporter 7-like.
  
 0.626
slc30a5
Uncharacterized protein.
  
 0.625
stub1
STIP1-like and U box-containing protein 1-like.
 
 
    0.624
slc30a6
Zinc transporter 6-like.
  
 0.619
LOC108936896
Protein transport protein Sec61 subunit alpha-like 1.
   
  
 0.612
SEC61A1
Protein transport protein Sec61 subunit alpha-like 1-like.
   
  
 0.612
slc30a9
Solute carrier family 30 member 9-1-like.
     
 0.596
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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