STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114910564Peptidase_M28 domain-containing protein. (560 aa)    
Predicted Functional Partners:
ccdc47
Coiled-coil domain-containing protein 47-like.
    
 
 0.784
tmem147
Uncharacterized protein.
    
 
 0.775
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.754
Z043_113543
Uncharacterized protein.
    
 
 0.678
LOC108936896
Protein transport protein Sec61 subunit alpha-like 1.
   
 
 0.666
SEC61A1
Protein transport protein Sec61 subunit alpha-like 1-like.
   
 
 0.666
rpl4
60S ribosomal protein L4-like.
    
   0.613
eprs1
Bifunctional glutamate/proline--tRNA ligase-like.
   
   0.609
rpl11
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.606
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.598
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.