STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sccpdhSaccharopine dehydrogenase-like oxidoreductase-like. (447 aa)    
Predicted Functional Partners:
foxred1
FAD-dependent oxidoreductase domain-containing protein 1-like.
      
 0.535
Scamp3
Secretory carrier-associated membrane protein.
      
 0.463
LOC108935571
Aldehyde dehydrogenase family 9 member A1-A-like; Belongs to the aldehyde dehydrogenase family.
     
 0.420
LOC108937697
Protein disulfide-isomerase TMX3-like.
      
 0.414
TMX3
Thioredoxin domain-containing protein.
      
 0.414
Lman1
Protein ERGIC-53-like.
      
 0.403
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.