LSM12 protein (Scleropages formosus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LSM12

Protein LSM12-like. (196 aa)

Predicted Functional Partners:

atxn2l

0.778

ENSSFOP00015039702

0.778

atxn2

0.778

LOC108930089

0.749

ENSSFOP00015009379

0.690

ddx6

0.690

LOC108922241

0.690

lsm1

0.563

Z043_122928

0.517

Rtraf

0.512

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFOP00015009379	ENSSFOP00015039702	ENSSFOP00015009379	ENSSFOP00015039702	annotation not available	annotation not available	0.698
ENSSFOP00015009379	LSM12	ENSSFOP00015009379	ENSSFOP00015031827	annotation not available	Protein LSM12-like.	0.690
ENSSFOP00015009379	Z043_122928	ENSSFOP00015009379	ENSSFOP00015036331	annotation not available	N(Alpha)-acetyltransferase 38, NatC auxiliary subunit-like.	0.482
ENSSFOP00015009379	atxn2	ENSSFOP00015009379	ENSSFOP00015073635	annotation not available	Ataxin-2-like.	0.734
ENSSFOP00015009379	atxn2l	ENSSFOP00015009379	ENSSFOP00015001416	annotation not available	Ataxin-2-like protein-like.	0.698
ENSSFOP00015009379	lsm1	ENSSFOP00015009379	ENSSFOP00015030429	annotation not available	U6 snRNA-associated Sm-like protein LSm1-like.	0.952
ENSSFOP00015039702	ENSSFOP00015009379	ENSSFOP00015039702	ENSSFOP00015009379	annotation not available	annotation not available	0.698
ENSSFOP00015039702	LOC108922241	ENSSFOP00015039702	ENSSFOP00015069908	annotation not available	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	0.698
ENSSFOP00015039702	LOC108930089	ENSSFOP00015039702	ENSSFOP00015049134	annotation not available	tRNA selenocysteine 1-associated protein 1-like.	0.773
ENSSFOP00015039702	LSM12	ENSSFOP00015039702	ENSSFOP00015031827	annotation not available	Protein LSM12-like.	0.778
ENSSFOP00015039702	Z043_122928	ENSSFOP00015039702	ENSSFOP00015036331	annotation not available	N(Alpha)-acetyltransferase 38, NatC auxiliary subunit-like.	0.679
ENSSFOP00015039702	ddx6	ENSSFOP00015039702	ENSSFOP00015046942	annotation not available	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.698
LOC108922241	ENSSFOP00015039702	ENSSFOP00015069908	ENSSFOP00015039702	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	annotation not available	0.698
LOC108922241	LSM12	ENSSFOP00015069908	ENSSFOP00015031827	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	Protein LSM12-like.	0.690
LOC108922241	Z043_122928	ENSSFOP00015069908	ENSSFOP00015036331	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	N(Alpha)-acetyltransferase 38, NatC auxiliary subunit-like.	0.482
LOC108922241	atxn2	ENSSFOP00015069908	ENSSFOP00015073635	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	Ataxin-2-like.	0.734
LOC108922241	atxn2l	ENSSFOP00015069908	ENSSFOP00015001416	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	Ataxin-2-like protein-like.	0.698
LOC108922241	ddx6	ENSSFOP00015069908	ENSSFOP00015046942	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.901
LOC108922241	lsm1	ENSSFOP00015069908	ENSSFOP00015030429	Putative ATP-dependent RNA helicase ddx6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm1-like.	0.952
LOC108930089	ENSSFOP00015039702	ENSSFOP00015049134	ENSSFOP00015039702	tRNA selenocysteine 1-associated protein 1-like.	annotation not available	0.773