STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_111533Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
rsad2
Elp3 domain-containing protein.
   
  
 0.498
ifih1
Interferon-induced helicase C domain-containing protein 1-like.
   
  
 0.491
dhx58
Putative ATP-dependent RNA helicase DHX58.
   
  
 0.485
DDX58
Uncharacterized protein.
   
  
 0.469
Z043_102416
E3 ubiquitin-protein ligase RNF213-like.
   
    0.465
Z043_108404
E3 ubiquitin-protein ligase RNF213-like.
   
    0.465
ENSSFOP00015040961
annotation not available
   
  
 0.449
ENSSFOP00015048342
annotation not available
   
  
 0.449
reep2
Receptor expression-enhancing protein 2-like.
     
 0.412
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.