STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF4Transcription factor 4-like. (694 aa)    
Predicted Functional Partners:
LOC108935074
T-cell acute lymphocytic leukemia protein 1-like.
    
 0.846
lmo2
Rhombotin-2-like.
    
 0.769
myod1
Myogenic factor.
    
 0.758
myf5
Myogenic factor 5.
    
 0.758
Myog
Myogenin-like.
   
 0.709
ENSSFOP00015038080
Achaete-scute complex protein.
   
 0.680
Ascl1
Achaete-scute1a-like.
   
 0.680
LOC114910592
Achaete-scute1b-like.
   
 0.680
tcf21
Transcription factor 21-like.
    
 0.671
ENSSFOP00015058157
Musculin (activated B-cell factor-1).
    
 0.646
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.