STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col10a1Tyrosine-protein kinase. (651 aa)    
Predicted Functional Partners:
Z043_116012
Fibrillar collagen NC1 domain-containing protein.
 
  
 
0.685
Z043_120832
Collagen alpha-1(V) chain-like.
 
      0.647
Tep1
Uncharacterized protein.
    
 0.516
LOC108930137
Uncharacterized protein.
  
  
  0.505
Z043_100360
VWFA domain-containing protein.
 
   
  0.473
LOC108924765
Complement C1q subcomponent subunit C-like.
  
 
0.447
Z043_100068
LAM_G_DOMAIN domain-containing protein.
 
      0.436
ENSSFOP00015020223
Collagen alpha-1(XXI) chain-like.
 
   
  0.419
ENSSFOP00015047900
annotation not available
 
   
 0.416
Z043_110055
Procollagen C-endopeptidase enhancer 2-like.
   
 0.405
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.