STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPLLHeterogeneous nuclear ribonucleoprotein L-like. (550 aa)    
Predicted Functional Partners:
hnrnpk
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.755
LOC108931318
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.755
ptbp2
Polypyrimidine tract-binding protein 2-like.
   
0.728
LOC108935247
Polypyrimidine tract-binding protein 2-like.
   
0.728
ptbp1
Polypyrimidine tract-binding protein 1-like.
   
0.728
LOC108921603
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
  0.676
Z043_115624
RRM domain-containing protein.
   
 0.668
LOC108941249
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.668
LOC108928831
SUMO-1-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.663
ube2i
SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.663
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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