STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkbh1Alkylated DNA repair protein alkB1-like. (384 aa)    
Predicted Functional Partners:
fto
Alpha-ketoglutarate-dependent dioxygenase FTO-like.
     
 0.808
Alkbh2
Fe2OG dioxygenase domain-containing protein.
      
 0.683
alkbh4
Alpha-ketoglutarate-dependent dioxygenase alkB 4-like.
   
  
 0.678
jmjd4
JmjC domain-containing protein 4-like.
   
  
 0.640
trmt6
tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like.
   
  
 0.599
Mettl4
Methyltransferase-like protein 4-like; Belongs to the MT-A70-like family.
   
  
 0.598
n6amt1
MTS domain-containing protein.
   
  
 0.595
alkbh8
Alkylated DNA repair protein alkB homolog 8 isoform X1.
      
 0.579
alkbh6
Alpha-ketoglutarate-dependent dioxygenase alkB6-like.
   
  
 0.579
alkbh7
Alkylated DNA repair protein alkB7-like.
      
 0.575
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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