STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF6Transcription initiation factor TFIID subunit 6-like. (689 aa)    
Predicted Functional Partners:
taf12
Transcription initiation factor TFIID subunit 12-like.
   
 0.979
taf11
Transcription initiation factor TFIID subunit 11-like.
    
 0.978
Taf2
Transcription initiation factor TFIID subunit 2-like.
    
 0.978
Taf8
Transcription initiation factor TFIID subunit 8-like.
    
 0.978
Taf7l
Transcription initiation factor TFIID subunit 7-like.
    
 0.978
LOC108934435
Uncharacterized protein.
    
 0.976
taf10
Transcription initiation factor TFIID subunit 10-like.
    
 0.968
LOC108920015
Transcription initiation factor TFIID subunit 9-like.
   
 0.968
taf13
Transcription initiation factor TFIID subunit 13-like.
    
 0.967
taf5l
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L-like.
   
 0.958
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.