STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANBP2E3 SUMO-protein ligase RanBP2-like. (2952 aa)    
Predicted Functional Partners:
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.999
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
nup155
Nuclear pore complex protein Nup155-like.
   
 0.999
nup43
Nucleoporin Nup43-like.
   
 0.999
nup160
Nuclear pore complex protein Nup160-like.
   
 0.999
NUP214
Uncharacterized protein.
   
 0.999
nup133
Uncharacterized protein.
   
 0.999
Z043_113821
Ran GTPase-activating protein 1-like.
   
 0.995
NUP54
Nucleoporin p54-like.
   
 0.995
nup88
Uncharacterized protein.
    
 0.995
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (30%) [HD]