STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108938179Tetraspan membrane protein of hair cell stereocilia-like. (232 aa)    
Predicted Functional Partners:
PCDH15
Uncharacterized protein.
   
 0.592
LOC108942258
CA domain-containing protein.
   
 0.592
pcdh15
Protocadherin-15-like.
   
 0.592
Z043_102130
Transmembrane channel-like protein.
   
 
 0.505
TMC3
Transmembrane channel-like protein.
   
 
 0.505
Z043_104242
Transmembrane inner ear expressed protein-like.
     
 0.475
Tmie
Transmembrane inner ear expressed protein-like.
     
 0.475
Z043_113573
Calcium and integrin-binding family member 3-like.
   
 
 0.470
ENSSFOP00015028985
Calcium and integrin-binding family member 2-like.
   
 
 0.470
Cib2
Calcium and integrin-binding family member 2-like.
   
 
 0.470
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.