STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTBP2Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (645 aa)    
Predicted Functional Partners:
Rbpjl
Recombining binding protein suppressor of hairless-like protein-like.
    
 0.921
rbpj
Recombining binding protein suppressor of hairless-like.
    
 0.921
LOC108938855
Histone deacetylase 1-like.
    
 0.913
Psat1
Phosphoserine aminotransferase-like.
  
 0.913
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.913
tcf7l2
Transcription factor 7-like 2-like.
    
 0.814
LOC108934364
HMG box domain-containing protein.
    
 0.813
LEF1
Lymphoid enhancer-binding factor 1-like protein-like.
    
 0.811
LOC108924316
Uncharacterized protein.
    
 0.811
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.682
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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