STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA3NEDD8-activating enzyme E1 catalytic subunit-like. (499 aa)    
Predicted Functional Partners:
Z043_101706
NEDD8-activating enzyme E1 regulatory subunit-like.
   
 0.984
trip12
E3 ubiquitin-protein ligase TRIP12-like.
    
 0.975
Z043_102720
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 
 0.945
LOC108937896
NEDD8.
   
 0.927
NEDD8
Uncharacterized protein.
   
 0.927
ube2f
NEDD8-conjugating enzyme UBE2F isoform X1.
    
 0.913
ube2m
NEDD8-conjugating enzyme Ubc12-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.913
Uba3
NEDD8-activating enzyme E1 catalytic subunit-like.
  
  
 
0.900
uba52
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.858
atg3
Autophagy-related protein 3.
   
 0.852
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.