STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_126322TNFR-Cys domain-containing protein. (242 aa)    
Predicted Functional Partners:
LOC108927382
Tumor necrosis factor-like.
   
 0.963
Z043_108409
TNF superfamily member 14-like; Belongs to the tumor necrosis factor family.
   
 0.930
LOC108919731
Tumor necrosis factor ligand superfamily member 14-like.
   
 0.815
LOC108929927
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.774
LOC108922584
Uncharacterized protein.
    
 0.774
LOC108938148
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.774
traf5
TNF receptor-associated factor.
    
 0.770
LOC108928984
Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.
   
 0.636
tnfsf11
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 0.636
LOC108933075
B- and T-lymphocyte attenuator-like.
   
 0.609
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.