STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTLC2Aminotran_1_2 domain-containing protein. (570 aa)    
Predicted Functional Partners:
kdsr
3-ketodihydrosphingosine reductase-like.
     
 0.959
Sptlc1
Serine palmitoyltransferase 1-like.
  
0.908
Shmt1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.846
shmt2
Serine hydroxymethyltransferase, mitochondrial-like.
  
 
 0.846
LOC108926093
Serine--pyruvate aminotransferase, mitochondrial-like.
    
 0.834
LOC108921324
Serine--pyruvate aminotransferase, mitochondrial-like.
    
 0.834
Z043_105580
PALP domain-containing protein.
   
 0.830
SDS
PALP domain-containing protein.
   
 0.830
LOC108919521
Serine dehydratase-like.
   
 0.830
cbs
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.830
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (22%) [HD]