STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108937362Multidrug resistance-associated protein 1-like. (1527 aa)    
Predicted Functional Partners:
Z043_101565
Multidrug resistance-associated protein 1-like.
  
  
 
0.902
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.616
gopc
Golgi-associated PDZ and coiled-coil motif-containing protein-like.
   
 0.526
prkn
Ubiquitin-like domain-containing protein.
     
 0.497
derl1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.495
LOC108934677
Ubiquitin carboxyl-terminal hydrolase.
    
  0.470
LOC108926342
Ubiquitin carboxyl-terminal hydrolase.
    
  0.470
Abcb6
ATP-binding cassette sub-family B member 6, mitochondrial-like.
    
0.460
Z043_118342
Ras-GEF domain-containing protein.
    
 0.459
Z043_107020
Rap guanine nucleotide exchange factor 4-like.
    
 0.459
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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