STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actn4Uncharacterized protein. (924 aa)    
Predicted Functional Partners:
LOC108939667
Vinculin-like.
   
 0.961
VCL
Vinculin-like.
   
 0.961
LOC108922540
Actin, cytoplasmic 1.
   
 0.949
actb
Actin, cytoplasmic 2-like; Belongs to the actin family.
   
 0.949
ctnna2
Uncharacterized protein.
   
 0.932
CTNNA2
Uncharacterized protein.
   
 0.932
ctnna1
Uncharacterized protein.
   
 0.932
zyx
Zyxin-like.
   
 0.929
LOC108940239
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like.
    
 0.917
MAGI1
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like.
    
 0.917
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.