STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actbActin, cytoplasmic 2-like; Belongs to the actin family. (393 aa)    
Predicted Functional Partners:
LOC108927095
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
0.973
LOC108931578
Actin-related protein 3B-like; Belongs to the actin family.
   
0.972
ACTR3
Actin-related protein 3-like; Belongs to the actin family.
   
0.972
was
Uncharacterized protein.
   
 0.965
WASL
Neural Wiskott-Aldrich syndrome protein-like.
    
 0.964
WASL-2
Uncharacterized protein.
    
 0.964
LOC108939667
Vinculin-like.
   
 0.962
VCL
Vinculin-like.
   
 0.962
LOC108922859
Profilin; Belongs to the profilin family.
   
 0.959
iqgap1
Ras GTPase-activating-like protein IQGAP1-like.
   
 0.956
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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