STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108925068Dmrt1a-like. (283 aa)    
Predicted Functional Partners:
amh
TGF_BETA_2 domain-containing protein.
      
 0.755
Kptn
Kaptin-like.
    
 0.711
SZT2
Protein SZT2-like.
    
 0.705
Z043_111230
MutS protein4-like.
    
 
 0.683
CYP19A1
Cytochrome P450 19b-like; Belongs to the cytochrome P450 family.
      
 0.682
depdc5
DEP domain-containing protein 5-like.
   
 0.680
wdr59
WD repeat-containing protein 59-like.
    
 0.668
wdr24
WD_REPEATS_REGION domain-containing protein.
    
 0.667
nprl2
Nitrogen permease regulator 2-like protein-like.
    
 0.663
sox9
Transcription factor Sox-9-A-like.
    
 0.616
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.