STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF516-2Uncharacterized protein. (889 aa)    
Predicted Functional Partners:
kdm1a
Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.
    
 0.635
Z043_121483
PR domain zinc finger protein 16-like.
    
 
 0.633
LOC108934203
C-terminal-binding protein 2-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
CTBP2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
LOC108936871
C-terminal-binding protein 2-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
Z043_118070
Uncharacterized protein.
    
 
 0.457
ctbp1
C-terminal-binding protein 1-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
Z043_112818
Thioredoxin domain-containing protein 3-like; Belongs to the NDK family.
    
 0.444
rbfa
Putative ribosome-binding factor A, mitochondrial.
    
 
 0.425
itgb8
Integrin beta; Belongs to the integrin beta chain family.
     
 0.404
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.