STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbln1Fibulin-1 isoform X1. (687 aa)    
Predicted Functional Partners:
cfp
Properdin-like.
 
 
 0.702
LOC108924813
Uncharacterized protein.
   
 
 0.571
MFAP2
ShKT domain-containing protein.
   
 0.544
Rbpjl
Recombining binding protein suppressor of hairless-like protein-like.
    
 0.515
rbpj
Recombining binding protein suppressor of hairless-like.
    
 0.515
Z043_106267
Uncharacterized protein.
   
 0.503
LOC108921180
Vitronectin-like.
    
 0.483
LOC108932382
Vitronectin-like.
    
 0.483
bub3
Mitotic checkpoint protein BUB3-like.
    
 0.441
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.436
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.