STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_108211L-threonine 3-dehydrogenase, mitochondrial-like. (389 aa)    
Predicted Functional Partners:
LOC108930839
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.879
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.879
Rps11
40S ribosomal protein S11-like; Belongs to the universal ribosomal protein uS17 family.
   
 0.800
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.786
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.782
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.781
Z043_108751
40S ribosomal protein S28-like.
   
 0.778
rps18
40S ribosomal protein S18-like; Belongs to the universal ribosomal protein uS13 family.
  
  0.770
rps19
40S ribosomal protein S19-like.
   
 0.765
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.757
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.