STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp6Putative GTP-binding protein 6. (567 aa)    
Predicted Functional Partners:
mrpl32
Mitochondrial ribosomal protein L32-like.
    
 
 0.933
Mrpl9
39S ribosomal protein L9, mitochondrial-like.
   
 
 0.932
rpl11
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.932
mrpl19
39S ribosomal protein L19, mitochondrial-like.
   
 
 0.896
Mrpl21
39S ribosomal protein L21, mitochondrial-like.
   
   0.889
rpl13a
60S ribosomal protein L13a-like; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.887
mrpl13
39S ribosomal protein L13, mitochondrial-like; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.887
mrpl27
39S ribosomal protein L27, mitochondrial-like.
   
 
 0.887
mrpl11
39S ribosomal protein L11, mitochondrial-like; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.875
LOC108937988
60S ribosomal protein L12-like; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.875
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.