STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108923947-4Histone H3.3. (136 aa)    
Predicted Functional Partners:
LOC108934098
Lysine-specific demethylase 6B-like.
   
 0.873
LOC108920542
Lysine-specific demethylase 6A-like.
   
 0.873
KDM6B
Lysine-specific demethylase 6B-like.
   
 0.873
LOC108933158
Lysine-specific demethylase 6A-like.
   
 0.873
setd2
Histone-lysine N-methyltransferase SETD2-like.
   
 0.801
leo1
RNA polymerase-associated protein LEO1-like.
   
 
 0.800
LOC108936077
Histone H2B; Belongs to the histone H2B family.
 
 
 0.795
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.789
rbbp5
Retinoblastoma-binding protein 5-like.
    
 0.783
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.771
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.