STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108921416RNA polymerase II elongation factor ELL-like. (562 aa)    
Predicted Functional Partners:
eaf1
ELL-associated factor 1-like.
    
 0.921
eaf2
ELL-associated factor 2-like.
    
 0.899
cdk9
Cyclin-dependent kinase 9-like; Belongs to the protein kinase superfamily.
    
 0.870
ICE2
NMDA receptor-regulated protein 2-like.
    
 0.836
polr2c
DNA-directed RNA polymerase II subunit RPB3-like.
    
 0.834
LOC108934430
AF4/FMR2 family member 4-like.
   
 0.828
aff4
Uncharacterized protein.
   
 0.828
LOC108936227
AF4/FMR2 family member 1-like.
   
 0.807
Polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.794
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.777
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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