STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stxbp5V-SNARE coiled-coil homology domain-containing protein. (1135 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.643
LOC108919378
Synaptosomal-associated protein 25-A-like.
   
 
 0.643
ENSSFOP00015076021
Synaptosomal-associated protein 25-like.
   
 
 0.589
exoc4
Sec8_exocyst domain-containing protein.
   
 
 0.579
LOC108935260
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.578
prkcz
Protein kinase C zeta type-like; Belongs to the protein kinase superfamily.
    
 
 0.578
ENSSFOP00015044047
annotation not available
    
 
 0.578
LOC108933955
Partitioning defective 6beta-like.
    
 
 0.515
pard6b
PB1 domain-containing protein.
    
 
 0.515
pard6g
Partitioning defective 6 gamma-like.
    
 
 0.515
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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