STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid1aAT-rich interactive domain-containing protein 1A-like. (2258 aa)    
Predicted Functional Partners:
Z043_114662
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.896
Z043_121451
SWI/SNF complex subunit SMARCC1-like.
   
 0.894
LOC108927968
SWI/SNF complex subunit SMARCC1-like.
   
 0.894
SMARCA4
Transcription activator BRG1-like.
   
 0.876
SMARCA2
Putative global transcription activator SNF2L2.
   
 0.876
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.
    
 0.867
Z043_100691
Bromo domain-containing protein.
   
 0.850
Z043_112436
Uncharacterized protein.
   
 0.815
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.785
mysm1
Histone H2A deubiquitinase MYSM1-like.
   
 0.785
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.