Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108925893 | LOC108934635 | ENSSFOP00015058003 | ENSSFOP00015017388 | Vacuolar protein sorting-associated protein 37C-like. | Tumor susceptibility protein 101-like. | 0.879 |
LOC108925893 | LOC108942320 | ENSSFOP00015058003 | ENSSFOP00015004025 | Vacuolar protein sorting-associated protein 37C-like. | Ubiquitin-conjugating enzyme E2 variant 3-like. | 0.800 |
LOC108925893 | chmp2a | ENSSFOP00015058003 | ENSSFOP00015005156 | Vacuolar protein sorting-associated protein 37C-like. | Charged multivesicular body protein 2a-like. | 0.736 |
LOC108925893 | mvb12a | ENSSFOP00015058003 | ENSSFOP00015065656 | Vacuolar protein sorting-associated protein 37C-like. | Multivesicular body subunit 12A-like. | 0.946 |
LOC108925893 | mvb12b | ENSSFOP00015058003 | ENSSFOP00015021180 | Vacuolar protein sorting-associated protein 37C-like. | Multivesicular body subunit 12B-like. | 0.943 |
LOC108925893 | snf8 | ENSSFOP00015058003 | ENSSFOP00015003756 | Vacuolar protein sorting-associated protein 37C-like. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.862 |
LOC108925893 | tsg101 | ENSSFOP00015058003 | ENSSFOP00015004612 | Vacuolar protein sorting-associated protein 37C-like. | UEV domain-containing protein. | 0.879 |
LOC108925893 | vps25 | ENSSFOP00015058003 | ENSSFOP00015014635 | Vacuolar protein sorting-associated protein 37C-like. | Vacuolar protein-sorting-associated protein 25-like. | 0.864 |
LOC108925893 | vps28 | ENSSFOP00015058003 | ENSSFOP00015055932 | Vacuolar protein sorting-associated protein 37C-like. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.959 |
LOC108925893 | vps36 | ENSSFOP00015058003 | ENSSFOP00015040385 | Vacuolar protein sorting-associated protein 37C-like. | Vacuolar protein-sorting-associated protein 36-like. | 0.854 |
LOC108934635 | LOC108925893 | ENSSFOP00015017388 | ENSSFOP00015058003 | Tumor susceptibility protein 101-like. | Vacuolar protein sorting-associated protein 37C-like. | 0.879 |
LOC108934635 | chmp2a | ENSSFOP00015017388 | ENSSFOP00015005156 | Tumor susceptibility protein 101-like. | Charged multivesicular body protein 2a-like. | 0.823 |
LOC108934635 | mvb12a | ENSSFOP00015017388 | ENSSFOP00015065656 | Tumor susceptibility protein 101-like. | Multivesicular body subunit 12A-like. | 0.953 |
LOC108934635 | mvb12b | ENSSFOP00015017388 | ENSSFOP00015021180 | Tumor susceptibility protein 101-like. | Multivesicular body subunit 12B-like. | 0.964 |
LOC108934635 | snf8 | ENSSFOP00015017388 | ENSSFOP00015003756 | Tumor susceptibility protein 101-like. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.862 |
LOC108934635 | tsg101 | ENSSFOP00015017388 | ENSSFOP00015004612 | Tumor susceptibility protein 101-like. | UEV domain-containing protein. | 0.901 |
LOC108934635 | vps25 | ENSSFOP00015017388 | ENSSFOP00015014635 | Tumor susceptibility protein 101-like. | Vacuolar protein-sorting-associated protein 25-like. | 0.842 |
LOC108934635 | vps28 | ENSSFOP00015017388 | ENSSFOP00015055932 | Tumor susceptibility protein 101-like. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.977 |
LOC108934635 | vps36 | ENSSFOP00015017388 | ENSSFOP00015040385 | Tumor susceptibility protein 101-like. | Vacuolar protein-sorting-associated protein 36-like. | 0.919 |
LOC108942320 | LOC108925893 | ENSSFOP00015004025 | ENSSFOP00015058003 | Ubiquitin-conjugating enzyme E2 variant 3-like. | Vacuolar protein sorting-associated protein 37C-like. | 0.800 |
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