STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cul5Cullin-5-like; Belongs to the cullin family. (840 aa)    
Predicted Functional Partners:
rnf7
RING-box protein 2-like.
    
 0.967
socs2
Suppressor of cytokine signaling 2-like.
   
 0.948
eloc
Transcription elongation factor B polypeptide 1-like; Belongs to the SKP1 family.
    
 0.933
eloc-2
elongin-C.
    
 0.933
Z043_107472
Rbx1 protein-like.
    
 0.931
LOC108939936
E3 ubiquitin-protein ligase RBX1-like.
    
 0.931
ELOB
Transcription elongation factor B polypeptide 2-like.
    
 0.929
LOC108919432
Transcription elongation factor B polypeptide 2-like.
    
 0.929
LOC108937896
NEDD8.
    
 0.913
NEDD8
Uncharacterized protein.
    
 0.913
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.