STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdr42e1-2Short-chain dehydrogenase/reductase family 42E member 1-like; Belongs to the 3-beta-HSD family. (381 aa)    
Predicted Functional Partners:
LOC108930839
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.883
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.883
LOC108933335
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.877
hsd17b7
3-keto-steroid reductase-like.
   
 0.871
fdft1
Squalene synthase-like.
  
 
 0.865
sqle
Squalene monooxygenase-like.
   
 
 0.865
sc5d
Lathosterol oxidase-like; Belongs to the sterol desaturase family.
   
 0.847
lss
Lanosterol synthase isoform X1.
  
 
 0.842
sigmar1
Sigma non-opioid intracellular receptor 1-like.
   
 
 0.827
ERG28
Uncharacterized protein.
   
 
 0.822
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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